maximed/dimension-reduction @ be1c6cc95e8fcbe59dc509ddb7f531636f2d95d4

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Maxime Devos be1c6cc95e Add channels.scm		пре 2 година
.gitignore	1476ecd172 Ignore things.	пре 2 година
COPYING	920a05d4a8 License: GPL3+	пре 2 година
README	0d4d528fad Update README.	пре 2 година
all-the-plots.sh	7434b6981a Increase memory quotum for all-the-plots.sh	пре 2 година
channels.scm	be1c6cc95e Add channels.scm	пре 2 година
construct-diffusion-map.py	feeb3e3fa7 Avoid trimming along dimensions with size 1	пре 2 година
courtemanche2D_kleinere_diffusionmaps.py	15b505211f Add various untracked python scripts	пре 2 година
courtemanche2D_phases.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_AP_veelpunten.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_AP_verbeterd.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_BOFC_verbeterd.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_PDL_9010.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_courtemanche.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_courtemanche1D.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_courtemanche2D_1.py	15b505211f Add various untracked python scripts	пре 2 година
dimensiereductie_courtemanche2D_spiraal.py	15b505211f Add various untracked python scripts	пре 2 година
manifest.scm	55a66cf0cf Add Guix manifest	пре 2 година
plot-diffusion-map.py	d6d3bba04b Remove xlabels and ylabels from plots as they are redundant.	пре 2 година
plot-some-times.py	7a56881f63 Make a standalone colourbar.	пре 2 година
plot.py	15b505211f Add various untracked python scripts	пре 2 година

		
				README
			
				The license is the GNU General Public License, with the or-later option, see COPYING for details.

There are four main scripts:

  * construct-diffusion-map.py

    This script takes ithildin simulation data and some parameters as input
    and calculates a diffusion map as output.

  * plot-diffusion-map.py

    This script takes a diffusion map as input and visualises it with various
    plots.

  * plot-some-times.py, all-the-plots.sh

    This generates all plots for the paper, and some more.

TODO:

  * Publiceren: https://gitlab.kuleuven.be/heartkor?
  * https://gitlab.com/heartkor/  ?
  * probably some (all?) of the gc.collect() are pointless.